Thomas Ales
007089dd48
- pyproject.toml replaces sras_viewer_requirements.txt (same pins) and adds a dev extra with pytest. - tools/test_refactor.py, test_alignment.py, test_gui.py become tests/test_compute.py, tests/test_alignment.py, tests/test_gui.py with assertions preserved verbatim. test_gui.py stays one ordered integration sequence over a shared module-scoped window. - check_equivalence.py: drop the dead pre-refactor monolith shim (and the _compute_angle_alignment alias it consumed), extend the pad sweep to (1, 2, 4, 8, 40), add legacy-v4 and big-endian int16 legs (new bps=2 option in make_test_sras) so the padded FFT path and the >i2 memmap path are in the baseline before the FFT rewrite. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
36 lines
800 B
TOML
36 lines
800 B
TOML
[build-system]
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requires = ["setuptools>=68"]
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build-backend = "setuptools.build_meta"
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[project]
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name = "sras-viewer"
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version = "0.1.0"
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description = "Viewer and processing tools for SRAS .sras scan files"
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requires-python = ">=3.12"
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dependencies = [
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"PyQt6==6.10.2",
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"numpy==2.4.1",
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"matplotlib==3.10.8",
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"scipy==1.18.0",
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# Angle alignment only: masked FFT phase correlation (skimage.registration).
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"scikit-image==0.26.0",
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# Faster rfft backend; the viewer falls back to scipy.fft without it.
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"pyFFTW==0.15.1",
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]
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[project.optional-dependencies]
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dev = ["pytest"]
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[tool.setuptools]
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py-modules = [
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"sras_format",
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"sras_compute",
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"sras_workers",
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"sras_viewer",
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"sras_average",
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"sras_edit_scans",
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]
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[tool.pytest.ini_options]
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testpaths = ["tests"]
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