#!/usr/bin/env python3 """Benchmark the FFT peak-search path: exact vs zoom, serial vs pooled. Reports wall time, waveforms/s, CPU utilization (utime+stime over wall, in cores), and verifies every variant against the exact reference image. Usage: python tools/bench_fft.py # synthetic, pads 1/8/40 python tools/bench_fft.py --pads 40 --spf 2500 --rows 8 --frames 1024 python tools/bench_fft.py --real /path/big.sras --real-rows 32 --pads 40 """ import argparse import resource import sys import tempfile import time from pathlib import Path import numpy as np sys.path.insert(0, str(Path(__file__).resolve().parent.parent)) import sras_compute as compute # noqa: E402 from sras_compute import compute_rf_image, set_fft_backend # noqa: E402 from sras_format import SrasFile # noqa: E402 import tools.make_test_sras as gen # noqa: E402 from tools.check_equivalence import row_slice # noqa: E402 def _timed(fn): r0 = resource.getrusage(resource.RUSAGE_SELF) t0 = time.perf_counter() out = fn() wall = time.perf_counter() - t0 r1 = resource.getrusage(resource.RUSAGE_SELF) cpu = (r1.ru_utime - r0.ru_utime) + (r1.ru_stime - r0.ru_stime) return out, wall, cpu / max(wall, 1e-9) def bench(sras, pads, backends): n_wf = sum(int(sras.n_rows[a]) * int(sras.n_frames[a]) for a in range(sras.n_angles)) spf = sras.samples_per_frame print(f"{n_wf} waveforms x {spf} samples, {sras.n_angles} angle(s)") print(f"{'pad':>4} {'backend':>8} {'variant':>16} {'wall':>9} " f"{'wf/s':>10} {'util':>6} match") for pad in pads: n_fft = spf * pad if pad > 1 else None for backend in backends: set_fft_backend(backend) def run(**kw): imgs = [compute_rf_image(sras, a, dc_threshold_mv=None, apply_bg_sub=True, n_fft=n_fft, **kw) for a in range(sras.n_angles)] return np.concatenate([i.ravel() for i in imgs]) ref, wall, util = _timed(lambda: run(exact=True)) rows = [("exact(serial)", ref, wall, util, True)] for label, kw in (("zoom(serial)", dict(max_workers=1)), ("zoom(pool)", {})): img, wall, util = _timed(lambda: run(**kw)) rows.append((label, img, wall, util, bool(np.array_equal(img, ref)))) for label, img, wall, util, ok in rows: print(f"{pad:>4} {backend:>8} {label:>16} {wall:>8.2f}s " f"{n_wf / wall:>10.0f} {util:>5.1f}x " f"{'OK' if ok else 'MISMATCH'}") def main(): p = argparse.ArgumentParser(description=__doc__) p.add_argument("--pads", default="1,8,40", help="comma-separated pad factors (default 1,8,40)") p.add_argument("--spf", type=int, default=2500) p.add_argument("--rows", type=int, default=8) p.add_argument("--frames", type=int, default=1024) p.add_argument("--backends", default=None, help="comma-separated (default: scipy,pyfftw if available)") p.add_argument("--real", help="path to a real .sras file") p.add_argument("--real-rows", type=int, default=32, help="rows of angle 0 to use from the real file") args = p.parse_args() pads = [int(x) for x in args.pads.split(",")] if args.backends: backends = args.backends.split(",") else: backends = ["scipy"] + (["pyfftw"] if compute.PYFFTW_AVAILABLE else []) if args.real: sras = row_slice(SrasFile(args.real), 0, args.real_rows) sras.data = [sras.data[0]] sras.n_angles = 1 bench(sras, pads, backends) else: with tempfile.TemporaryDirectory(prefix="sras_bench_") as tmp: path = Path(tmp) / "bench.sras" gen.write(path, n_angles=1, seed=0, samples_per_frame=args.spf, geometry=[(args.rows, args.frames)]) bench(SrasFile(str(path)), pads, backends) if __name__ == "__main__": main()